Recent publications

Pf7: an open dataset of Plasmodium falciparum genome variation in 20,000 worldwide samples.Abdel Hamid MM, Abdelraheem MH, Acheampong DO, Ahouidi A, Ali M, Almagro-Garcia J, Amambua-Ngwa A, Amaratunga C, Amenga-Etego L, Andagalu B, Anderson T, Andrianaranjaka V, Aniebo I, Aninagyei E, Ansah F, Ansah PO, Apinjoh T, Arnaldo P, Ashley E, Auburn S, Awandare GA, Ba H, Baraka V, Barry A, Bejon P, Bertin GI, Boni MF, Borrmann S, Bousema T, Bouyou-Akotet M, Branch O, Bull PC, Cheah H, Chindavongsa K, Chookajorn T, Chotivanich K, Claessens A, Conway DJ, Corredor V, Courtier E, Craig A, D'Alessandro U, Dama S, Day N, Denis B, Dhorda M, Diakite M, Djimde A, Dolecek C, Dondorp A, Doumbia S, Drakeley C, Drury E, Duffy P, Echeverry DF, Egwang TG, Enosse SMM, Erko B, Fairhurst RM, Faiz A, Fanello CA, Fleharty M, Forbes M, Fukuda M, Gamboa D, Ghansah A, Golassa L, Goncalves S, Harrison GLA, Healy SA, Hendry JA, Hernandez-Koutoucheva A, Hien TT, Hill CA, Hombhanje F, Hott A, Htut Y, Hussein M, Imwong M, Ishengoma D, Jackson SA, Jacob CG, Jeans J, Johnson KJ, Kamaliddin C, Kamau E, Keatley J, Kochakarn T, Konate DS, Konaté A, Kone A, Kwiatkowski DP, Kyaw MP, Kyle D, Lawniczak M, Lee SK, Lemnge M, Lim P, Lon C, Loua KM, Mandara CI, Marfurt J, Marsh K, Maude RJ, Mayxay M, Maïga-Ascofaré O, Miotto O, Mita T, Mobegi V, Mohamed AO, Mokuolu OA, Montgomery J, Morang'a CM, Mueller I, Murie K, Newton PN, Ngo Duc T, Nguyen T, Nguyen TN, Nguyen Thi Kim T, Nguyen Van H, Noedl H, Nosten F, Noviyanti R, Ntui VN, Nzila A, Ochola-Oyier LI, Ocholla H, Oduro A, Omedo I, Onyamboko MA, Ouedraogo JB, Oyebola K, Oyibo WA, Pearson R, Peshu N, Phyo AP, Plowe CV, Price RN, Pukrittayakamee S, Quang HH, Randrianarivelojosia M, Rayner JC, Ringwald P, Rosanas-Urgell A, Rovira-Vallbona E, Ruano-Rubio V, Ruiz L, Saunders D, Shayo A, Siba P, Simpson VJ, Sissoko MS, Smith C, Su XZ, Sutherland C, Takala-Harrison S, Talman A, Tavul L, Thanh NV, Thathy V, Thu AM, Toure M, Tshefu A, Verra F, Vinetz J, Wellems TE, Wendler J, White NJ, Whitton G, Yavo W, van der Pluijm RW
Wellcome Open Res, (2023). 8:22

Development of a legume-enriched feed for treatment of severe acute malnutrition.Walsh K, Delamare de la Villenaise de Chenevarin G, McGurk J, Maitland K, Frost G
Wellcome Open Res, (2021). 6:206

Diagnosis and management of tuberculosis in children and adolescents. A desk guide for primary health care workers..Graham SM, Oliwa JN
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Mortality in rural coastal Kenya measured using the Kilifi Health and Demographic Surveillance System: a 16-year descriptive analysis [version 2; peer review: 1 approved, 1 approved with reservations].Otiende M, Bauni E, Nyaguara A, Amadi D, Nyundo C, Tsory E, Walumbe D, Kinuthia M, Kihuha N, Kahindi M, Nyutu G, Moisi J, Deribew A, Agweyu A, Marsh K, Tsofa B, Bejon P, Bottomley C, Williams TN, Scott JAG
Wellcome Open Research, (2023). 6:

Perspectives on reasons for suicidal behaviour and recommendations for suicide prevention in Kenya: qualitative study.Ongeri L, Nyawira M, Kariuki SM, Bitta M, Schubart C, Penninx BEJJ, Newton CRJC, Tijdink JK
BJPsych Open, (2023). 9:e38

Essential emergency and critical care as a health system response to critical illness and the COVID19 pandemic: what does it cost?.Guinness L, Kairu A, Kuwawenaruwa A, Khalid K, Awadh K, Were V, Barasa E, Shah H, Baker P, Schell CO, Baker T
Cost Eff Resour Alloc, (2023). 21:15

Validation of saline, PBS and a locally produced VTM at varying storage conditions to detect the SARS-CoV-2 virus by qRT-PCR.Ngetsa C, Osoti V, Okanda D, Marura F, Shah K, Karanja H, Mugo D, Gitonga J, Mutunga M, Lewa C, Orindi B, Bejon P, Ochola-Oyier LI
PLoS One, (2023). 18:e0280685

Recalibrating prognostic models to improve predictions of in-hospital child mortality in resource-limited settings.Ogero M, Ndiritu J, Sarguta R, Tuti T, Aluvaala J, Akech S
Paediatr Perinat Epidemiol, (2023). 37:313-321

Anthropometric criteria for best identifying children at high risk of mortality: a pooled analysis of 12 cohorts.Khara T, Myatt M, Sadler K, Bahwere P, Berkley JA, Black RE, Boyd E, Garenne M, Isanaka S, Lelijveld N, McDonald C, Mertens A, Mwangome M, O'Brien K, Stobaugh H, Taneja S, West KPJr, Briend A
Public Health Nutr, (2023). :1-38

In praise of Prais-Winsten: An evaluation of methods used to account for autocorrelation in interrupted time series.Bottomley C, Ooko M, Gasparrini A, Keogh RH
Stat Med, (2023). 42:1277-1288

Prognostic value of different anthropometric indices over different measurement intervals to predict mortality in 6-59-month-old children.Briend A, Myatt M, Berkley JA, Black RE, Boyd E, Garenne M, Lelijveld N, Isanaka S, McDonald CM, Mwangwome M, O'Brien KS, Schwinger C, Stobaugh H, Taneja S, West KP, Khara T
Public Health Nutr, (2023). :1-12

Correction: Machine learning for predicting neurodegenerative diseases in the general older population: a cohort study.Aguayo GA, Zhang L, Vaillant M, Ngari M, Perquin M, Moran V, Huiart L, Kruger R, Azuaje F, Ferdynus C, Fagherazzi G
BMC Med Res Methodol, (2023). 23:32

Respecting relational agency in the context of vulnerability: What can research ethics learn from the social sciences?.Roest J, Nkosi B, Seeley J, Molyneux S, Kelley M
Bioethics, (2023). 37:379-388

Complementary measurement of nontyphoidal Salmonella-specific IgG and IgA antibodies in oral fluid and serum.Elias SC, Muthumbi E, Mwanzu A, Wanjiku P, Mutiso A, Simon R, MacLennan CA
Heliyon, (2023). 9:e12071

Reporting of Social Determinants of Health in Pediatric Sepsis Studies.Menon K, Sorce LR, Argent A, Bennett TD, Carrol ED, Kissoon N, Sanchez-Pinto LN, Schlapbach LJ, de Souza DC, Watson RS, Wynn JL, Zimmerman JJ, Ranjit S, Pediatric Sepsis Definition Taskforce Pediatric Sepsis Definition Taskforce are as follows
Pediatr Crit Care Med, (2023). 24:301-310

Pupal productivity of larval habitats of Aedes aegypti in Msambweni, Kwale County, Kenya.Mwakutwaa AS, Ngugi HN, Ndenga BA, Krystosik A, Ngari M, Abubakar LU, Yonge S, Kitron U, LaBeaud AD, Mutuku FM
Parasitol Res, (2023). 122:801-814

Tackling post-discharge mortality in children living in LMICs to reduce child deaths.Akech S, Kwambai T, Wiens MO, Chandna A, Berkley JA, Snow RW
Lancet Child Adolesc Health, (2023). 7:149-151

Co-morbid mental health conditions in people with epilepsy and association with quality of life in low- and middle-income countries: a systematic review and meta-analysis.Tsigebrhan R, Derese A, Kariuki SM, Fekadu A, Medhin G, Newton CR, Prince MJ, Hanlon C
Health Qual Life Outcomes, (2023). 21:5

A global core outcome measurement set for snakebite clinical trials.Abouyannis M, Esmail H, Hamaluba M, Ngama M, Mwangudzah H, Mumba N, Yeri BK, Mwalukore S, Alphan HJ, Aggarwal D, Alcoba G, Cammack N, Chippaux JP, Coldiron ME, Gutierrez JM, Habib AG, Harrison RA, Isbister GK, Lavonas EJ, Martins D, Ribeiro I, Watson JA, Williams DJ, Casewell NR, Walker SA, Lalloo DG, Snakebite Global Core Outcome Set Study Group
Lancet Glob Health, (2023). 11:e296-e300

Quality of maternal healthcare and travel time influence birthing service utilisation in Ghanaian health facilities: a geographical analysis of routine health data.Dotse-Gborgbortsi W, Tatem AJ, Matthews Z, Alegana VA, Ofosu A, Wright JA
BMJ Open, (2023). 13:e066792