James Nokes

Mortality after Inpatient Treatment for Severe Pneumonia in Children: a Cohort Study.Ngari, M. M. Fegan, G. Mwangome, M. K. Ngama, M. J. Mturi, N. Scott, J. A. G. Bauni, E. Nokes, D. J. Berkley, J. A.
Paediatr Perinat Epidemiol, (2017). 31:233-242

Recent sequence variation in probe binding site affected detection of respiratory syncytial virus group B by real-time RT-PCR.Kamau, E. Agoti, C. N. Lewa, C. S. Oketch, J. Owor, B. E. Otieno, G. P. Bett, A. Cane, P. A. Nokes, D. J.
J Clin Virol, (2017). 88:21-25

Spread and Evolution of Respiratory Syncytial Virus A Genotype ON1, Coastal Kenya, 2010-2015.Otieno, J. R. Kamau, E. M. Agoti, C. N. Lewa, C. Otieno, G. Bett, A. Ngama, M. Cane, P. A. Nokes, D. J.
Emerg Infect Dis, (2017). 23:264-271

Predicting the relative impacts of maternal and neonatal respiratory syncytial virus (RSV) vaccine target product profiles: A consensus modelling approach.Pan-Ngum, W. Kinyanjui, T. Kiti, M. Taylor, S. Toussaint, J. F. Saralamba, S. Van Effelterre, T. Nokes, D. J. White, L. J.
Vaccine, (2017). 35:403-409

Cohort Profile: The Kilifi Vaccine Monitoring Study.Adetifa, I. M. O. Bwanaali, T. Wafula, J. Mutuku, A. Karia, B. Makumi, A. Mwatsuma, P. Bauni, E. Hammitt, L. L. Nokes, D. J. Maree, E. Tabu, C. Kamau, T. Mataza, C. Williams, T. N. Scott, J. A. G.
Int J Epidemiol, (2017). 46:792-792h

Quantification and determinants of the amount of respiratory syncytial virus (RSV) shed using real time PCR data from a longitudinal household study.Wathuo, M. Medley, G. F. Nokes, D. J. Munywoki, P. K.
Wellcome Open Res, (2016). 1:27

Absence of Association between Cord Specific Antibody Levels and Severe Respiratory Syncytial Virus (RSV) Disease in Early Infants: A Case Control Study from Coastal Kenya.Nyiro, J. U. Sande, C. J. Mutunga, M. Kiyuka, P. K. Munywoki, P. K. Scott, J. A. Nokes, D. J.
PLoS One, (2016). 11:e0166706

Quantifying social contacts in a household setting of rural Kenya using wearable proximity sensors.Kiti, M. C. Tizzoni, M. Kinyanjui, T. M. Koech, D. C. Munywoki, P. K. Meriac, M. Cappa, L. Panisson, A. Barrat, A. Cattuto, C. Nokes, D. J.
EPJ Data Sci, (2016). 5:21

Human Rhinovirus B and C Genomes from Rural Coastal Kenya.Agoti, C. N. Kiyuka, P. K. Kamau, E. Munywoki, P. K. Bett, A. van der Hoek, L. Kellam, P. Nokes, D. J. Cotten, M.
Genome Announc, (2016). 4:

Human metapneumovirus epidemiological and evolutionary patterns in Coastal Kenya, 2007-11.Owor, B. E. Masankwa, G. N. Mwango, L. C. Njeru, R. W. Agoti, C. N. Nokes, D. J.
BMC Infect Dis, (2016). 16:301

Influenza activity in Kenya, 2007-2013: timing, association with climatic factors, and implications for vaccination campaigns.Emukule, G. O. Mott, J. A. Spreeuwenberg, P. Viboud, C. Commanday, A. Muthoka, P. Munywoki, P. K. Nokes, D. J. van der Velden, K. Paget, J. W.
Influenza Other Respir Viruses, (2016). 10:375-85

Molecular Evolutionary Dynamics of Respiratory Syncytial Virus Group A in Recurrent Epidemics in Coastal Kenya.Otieno, J. R. Agoti, C. N. Gitahi, C. W. Bett, A. Ngama, M. Medley, G. F. Cane, P. A. Nokes, D. J.
J Virol, (2016). 90:4990-5002

Infectious disease and health systems modelling for local decision making to control neglected tropical diseases.Hollingsworth, T. D. Langley, I. Nokes, D. J. Macpherson, E. E. McGivern, G. Adams, E. R. Bockarie, M. J. Mortimer, K. Reimer, L. J. Squire, B. Torr, S. J. Medley, G. F.
BMC Proc, (2015). 9:S6

Vaccine Induced Herd Immunity for Control of Respiratory Syncytial Virus Disease in a Low-Income Country Setting.Kinyanjui, T. M. House, T. A. Kiti, M. C. Cane, P. A. Nokes, D. J. Medley, G. F.
PLoS One, (2015). 10:e0138018

Successive Respiratory Syncytial Virus Epidemics in Local Populations Arise from Multiple Variant Introductions, Providing Insights into Virus Persistence.Agoti, C. N. Otieno, J. R. Ngama, M. Mwihuri, A. G. Medley, G. F. Cane, P. A. Nokes, D. J.
J Virol, (2015). 89:11630-42

Frequent Asymptomatic Respiratory Syncytial Virus Infections During an Epidemic in a Rural Kenyan Household Cohort.Munywoki, P. K. Koech, D. C. Agoti, C. N. Bett, A. Cane, P. A. Medley, G. F. Nokes, D. J.
J Infect Dis, (2015). 212:1711-8

Quantifying maternally derived respiratory syncytial virus specific neutralising antibodies in a birth cohort from coastal Kenya.Nyiro, J. U. Sande, C. Mutunga, M. Kiyuka, P. K. Munywoki, P. K. Scott, J. A. Nokes, D. J.
Vaccine, (2015). 33:1797-801

Local evolutionary patterns of human respiratory syncytial virus derived from whole-genome sequencing.Agoti, C. N. Otieno, J. R. Munywoki, P. K. Mwihuri, A. G. Cane, P. A. Nokes, D. J. Kellam, P. Cotten, M.
J Virol, (2015). 89:3444-54

Influence of age, severity of infection, and co-infection on the duration of respiratory syncytial virus (RSV) shedding.Munywoki, P. K. Koech, D. C. Agoti, C. N. Kibirige, N. Kipkoech, J. Cane, P. A. Medley, G. F. Nokes, D. J.
Epidemiol Infect, (2015). 143:804-12

Quantifying age-related rates of social contact using diaries in a rural coastal population of Kenya.Kiti, M. C. Kinyanjui, T. M. Koech, D. C. Munywoki, P. K. Medley, G. F. Nokes, D. J.
PLoS One, (2014). 9:e104786