George Githinji

Journal of Open Source Software (JOSS): design and first-year review.Smith AM Niemeyer KE Katz DS Barba LA Githinji G Gymrek M Huff KD Madan CR Mayes AC Moerman KM Prins P Ram K Rokem A Teal TK Guimera RV Vanderplas JT
PeerJ Prepr, (2018). 4:e147

Evaluating the performance of tools used to call minority variants from whole genome short-read data.Said Mohammed K Kibinge N Prins P Agoti CN Cotten M Nokes DJ Brand S Githinji G
Wellcome Open Res, (2018). 3:21

A re-assessment of gene-tag classification approaches for describing var gene expression patterns during human Plasmodium falciparum malaria parasite infections.Githinji G Bull PC
Wellcome Open Res, (2017). 2:86

A27 Using whole genome sequence data and minority variant profiles to elucidate transmission patterns during RSV household outbreaks.Githinji G Agoti C Munywoki P Bett A Kellam P Cotton M Nokes DJ
Virus Evol, (2017). 3:

A26 Transmission patterns and evolution of RSV in a community outbreak identified by genomic analysis.Agoti CN Munywoki PK Phan MVT Otieno JR Kamau E Bett A Kombe I Githinji G Medley GF Cane PA Kellam P Cotton M Nokes DJ
Virus Evol, (2017). 3:

Transmission patterns and evolution of respiratory syncytial virus in a community outbreak identified by genomic analysis.Agoti CN Munywoki PK Phan MVT Otieno JR Kamau E Bett A Kombe I Githinji G Medley GF Cane PA Kellam P Cotten M Nokes DJ
Virus Evol, (2017). 3:vex006

Prognostic indicators of life-threatening malaria are associated with distinct parasite variant antigen profiles.Warimwe GM Fegan G Musyoki JN Newton CR Opiyo M Githinji G Andisi C Menza F Kitsao B Marsh K Bull PC
Sci Transl Med, (2012). 4:129ra45

Biogem: an effective tool-based approach for scaling up open source software development in bioinformatics.Bonnal RJ Aerts J Githinji G Goto N MacLean D Miller CA Mishima H Pagani M Ramirez-Gonzalez R Smant G Strozzi F Syme R Vos R Wennblom TJ Woodcroft BJ Katayama T Prins P
Bioinformatics, (2012). 28:1035-7