Publications

Epidemiology and Demography

Community Protection.Fine, P. E. M. Mulholland, K. Scott, J. A. Edmunds, W. J.
Plotkin's Vaccines, (2018). :1512-1531.e5

Children's Oxygen Administration Strategies Trial (COAST): A randomised controlled trial of high flow versus oxygen versus control in African children with severe pneumonia.Maitland, K. Kiguli, S. Opoka, R. O. Olupot-Olupot, P. Engoru, C. Njuguna, P. Bandika, V. Mpoya, A. Bush, A. Williams, T. N. Grieve, R. Sadique, Z. Fraser, J. Harrison, D. Rowan, K.
Wellcome Open Res, (2017). 2:100

No Evidence that Knops Blood Group Polymorphisms Affect Complement Receptor 1 Clustering on Erythrocytes.Swann, O. V. Harrison, E. M. Opi, D. H. Nyatichi, E. Macharia, A. Uyoga, S. Williams, T. N. Rowe, J. A.
Sci Rep, (2017). 7:17825

Correction to: An exploration of mortality risk factors in non-severe pneumonia in children using clinical data from Kenya.Tuti, T. Agweyu, A. Mwaniki, P. Peek, N. English, M. Clinical Information Network Author, Group
BMC Med, (2017). 15:212

Subphenotypes of sickle cell disease in Africa.Piel, F. B. Williams, T. N.
Blood, (2017). 130:2157-2158

An exploration of mortality risk factors in non-severe pneumonia in children using clinical data from Kenya.Tuti, T. Agweyu, A. Mwaniki, P. Peek, N. English, M. Clinical Information Network Author, Group
BMC Med, (2017). 15:201

Does audit and feedback improve the adoption of recommended practices? Evidence from a longitudinal observational study of an emerging clinical network in Kenya.Gachau, S. Ayieko, P. Gathara, D. Mwaniki, P. Ogero, M. Akech, S. Maina, M. Agweyu, A. Oliwa, J. Oliwa, J. Julius, T. Malla, L. Wafula, J. Mbevi, G. Irimu, G. English, M.
BMJ Glob Health, (2017). 2:e000468

A re-assessment of gene-tag classification approaches for describing var gene expression patterns during human Plasmodium falciparum malaria parasite infections.Githinji, G. Bull, P. C.
Wellcome Open Res, (2017). 2:86

Detecting Malaria Hotspots: A Comparison of Rapid Diagnostic Test, Microscopy, and Polymerase Chain Reaction.Mogeni, P. Williams, T. N. Omedo, I. Kimani, D. Ngoi, J. M. Mwacharo, J. Morter, R. Nyundo, C. Wambua, J. Nyangweso, G. Kapulu, M. Fegan, G. Bejon, P.
J Infect Dis, (2017). 216:1091-1098

Declining Malaria Transmission Differentially Impacts the Maintenance of Humoral Immunity to Plasmodium falciparum in Children.Mugyenyi, C. K. Elliott, S. R. Yap, X. Z. Feng, G. Boeuf, P. Fegan, G. Osier, F. F. H. Fowkes, F. J. I. Avril, M. Williams, T. N. Marsh, K. Beeson, J. G.
J Infect Dis, (2017). 216:887-898

The frequency and severity of epistaxis in children with sickle cell anaemia in eastern Uganda: a case-control study.Nardo-Marino, A. Williams, T. N. Olupot-Olupot, P.
BMC Hematol, (2017). 17:14

Global respiratory syncytial virus-associated mortality in young children (RSV GOLD): a retrospective case series.Scheltema, N. M. Gentile, A. Lucion, F. Nokes, D. J. Munywoki, P. K. Madhi, S. A. Groome, M. J. Cohen, C. Moyes, J. Thorburn, K. Thamthitiwat, S. Oshitani, H. Lupisan, S. P. Gordon, A. Sanchez, J. F. O'Brien, K. L. Perch Study Group Gessner, B. D. Sutanto, A. Mejias, A. Ramilo, O. Khuri-Bulos, N. Halasa, N. de-Paris, F. Pires, M. R. Spaeder, M. C. Paes, B. A. Simoes, E. A. F. Leung, T. F. da Costa Oliveira, M. T. de Freitas Lazaro Emediato, C. C. Bassat, Q. Butt, W. Chi, H. Aamir, U. B. Ali, A. Lucero, M. G. Fasce, R. A. Lopez, O. Rath, B. A. Polack, F. P. Papenburg, J. Roglic, S. Ito, H. Goka, E. A. Grobbee, D. E. Nair, H. Bont, L. J.
Lancet Glob Health, (2017). 5:e984-e991

Gastroenteritis Aggressive Versus Slow Treatment For Rehydration (GASTRO). A pilot rehydration study for severe dehydration: WHO plan C versus slower rehydration.Houston, K. A. Gibb, J. G. Mpoya, A. Obonyo, N. Olupot-Olupot, P. Nakuya, M. Evans, J. A. George, E. C. Gibb, D. M. Maitland, K.
Wellcome Open Res, (2017). 2:62

A27 Using whole genome sequence data and minority variant profiles to elucidate transmission patterns during RSV household outbreaks.Githinji, G. Agoti, C. Munywoki, P. Bett, A. Kellam, P. Cotton, M. Nokes, D. J.
Virus Evol, (2017). 3:

A26 Transmission patterns and evolution of RSV in a community outbreak identified by genomic analysis.Agoti, C. N. Munywoki, P. K. Phan, M. V. T. Otieno, J. R. Kamau, E. Bett, A. Kombe, I. Githinji, G. Medley, G. F. Cane, P. A. Kellam, P. Cotton, M. Nokes, D. J.
Virus Evol, (2017). 3:

A49 Molecular evolutionary dynamics of respiratory syncytial virus group A in recurrent epidemics in coastal Kenya.Otieno, J. R. Agoti, C. N. Gitahi, C. W. Bett, A. Ngama, M. Medley, G. F. Cane, P. A. Nokes, D. J.
Virus Evol, (2017). 3:

Sustained reduction in vaccine-type invasive pneumococcal disease despite waning effects of a catch-up campaign in Kilifi, Kenya: A mathematical model based on pre-vaccination data.Ojal, J. Flasche, S. Hammitt, L. L. Akech, D. Kiti, M. C. Kamau, T. Adetifa, I. Nurhonen, M. Scott, J. A. G. Auranen, K.
Vaccine, (2017). 35:4561-4568

Global, regional, and national disease burden estimates of acute lower respiratory infections due to respiratory syncytial virus in young children in 2015: a systematic review and modelling study.Shi, T. McAllister, D. A. O'Brien, K. L. Simoes, E. A. F. Madhi, S. A. Gessner, B. D. Polack, F. P. Balsells, E. Acacio, S. Aguayo, C. Alassani, I. Ali, A. Antonio, M. Awasthi, S. Awori, J. O. Azziz-Baumgartner, E. Baggett, H. C. Baillie, V. L. Balmaseda, A. Barahona, A. Basnet, S. Bassat, Q. Basualdo, W. Bigogo, G. Bont, L. Breiman, R. F. Brooks, W. A. Broor, S. Bruce, N. Bruden, D. Buchy, P. Campbell, S. Carosone-Link, P. Chadha, M. Chipeta, J. Chou, M. Clara, W. Cohen, C. de Cuellar, E. Dang, D. A. Dash-Yandag, B. Deloria-Knoll, M. Dherani, M. Eap, T. Ebruke, B. E. Echavarria, M. de Freitas Lazaro Emediato, C. C. Fasce, R. A. Feikin, D. R. Feng, L. Gentile, A. Gordon, A. Goswami, D. Goyet, S. Groome, M. Halasa, N. Hirve, S. Homaira, N. Howie, S. R. C. Jara, J. Jroundi, I. Kartasasmita, C. B. Khuri-Bulos, N. Kotloff, K. L. Krishnan, A. Libster, R. Lopez, O. Lucero, M. G. Lucion, F. Lupisan, S. P. Marcone, D. N. McCracken, J. P. Mejia, M. Moisi, J. C. Montgomery, J. M. Moore, D. P. Moraleda, C. Moyes, J. Munywoki, P. Mutyara, K. Nicol, M. P. Nokes, D. J. Nymadawa, P. da Costa Oliveira, M. T. Oshitani, H. Pandey, N. Paranhos-Baccala, G. Phillips, L. N. Picot, V. S. Rahman, M. Rakoto-Andrianarivelo, M. Rasmussen, Z. A. Rath, B. A. Robinson, A. Romero, C. Russomando, G. Salimi, V. Sawatwong, P. Scheltema, N. Schweiger, B. Scott, J. A. G. Seidenberg, P. Shen, K. Singleton, R. Sotomayor, V. Strand, T. A. Sutanto, A. Sylla, M. Tapia, M. D. Thamthitiwat, S. Thomas, E. D. Tokarz, R. Turner, C. Venter, M. Waicharoen, S. Wang, J. Watthanaworawit, W. Yoshida, L. M. Yu, H. Zar, H. J. Campbell, H. Nair, H. R. S. V. Global Epidemiology Network
Lancet, (2017). 390:946-958

Prevalence of Inherited Hemoglobin Disorders and Relationships with Anemia and Micronutrient Status among Children in Yaounde and Douala, Cameroon.Engle-Stone, R. Williams, T. N. Nankap, M. Ndjebayi, A. Gimou, M. M. Oyono, Y. Tarini, A. Brown, K. H. Green, R.
Nutrients, (2017). 9:

Assessing the efficiency of catch-up campaigns for the introduction of pneumococcal conjugate vaccine: a modelling study based on data from PCV10 introduction in Kilifi, Kenya.Flasche, S. Ojal, J. Le Polain de Waroux, O. Otiende, M. O'Brien, K. L. Kiti, M. Nokes, D. J. Edmunds, W. J. Scott, J. A. G.
BMC Med, (2017). 15:113