Currently, KWTRP has 3 main hubs in Kilifi, Nairobi and Mbale, but also works in collaborations with researchers in Harar in Ethiopia and Bagamoyo in Tanzania. In Kilifi the Programme conducts research in Kilifi County Hospital and nearby health facilities, such as Pingilikani, Ngerenya, Junju, Ganze Health Centre, Bamba sub county hospital, Dida, Madamani dispensaries, Mtwapa among others. The programme also hosts a comprehensive Health demographic surveillance system where KWTRP staff visit people in their homes and collects population-based data which is then used to support research work. The Programme has also established a clinical surveillance network with 17 hospitals across Kenya. This network collects routine hospital admission data that is used for decision making and for researchers. The hospital in the network include Coast General Hospital in Mombasa, Mbagathi, Machakos, Pumwani Hospitals in Nairobi etc. KEMRI Kilifi also works in other parts of Kenya and in other countries in Africa such as Mbale, Uganda.