Emergence and transmission dynamics of the FY.4 Omicron variant in Kenya.Musundi S Mwanga M Lambisia A Morobe JM Murunga N Moraa E Ndwiga L Cheruiyot R Musyoki J Mutunga M Guzman-Rincon LM Sande C Mwangangi J Bejon P Ochola-Oyier LI Nokes DJ Agoti CN Nyiro J Githinji G
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Genomic epidemiology of human adenovirus F40 and F41 in coastal Kenya: A retrospective hospital-based surveillance study (2013-2022).Lambisia AW Makori TO Mutunga M Cheruiyot R Murunga N Quick J Githinji G Nokes DJ Houldcroft CJ Agoti CN
Virus Evol, (2023). 9:vead023

Epidemiological and evolutionary dynamics of influenza B virus in coastal Kenya as revealed by genomic analysis of strains sampled over a single season.Nyasimi FM Owuor DC Ngoi JM Mwihuri AG Otieno GP Otieno JR Githinji G Nyiro JU Nokes DJ Agoti CN
Virus Evol, (2020). 6:veaa045

A27 Using whole genome sequence data and minority variant profiles to elucidate transmission patterns during RSV household outbreaks.Githinji G Agoti C Munywoki P Bett A Kellam P Cotton M Nokes DJ
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A26 Transmission patterns and evolution of RSV in a community outbreak identified by genomic analysis.Agoti CN Munywoki PK Phan MVT Otieno JR Kamau E Bett A Kombe I Githinji G Medley GF Cane PA Kellam P Cotton M Nokes DJ
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Transmission patterns and evolution of respiratory syncytial virus in a community outbreak identified by genomic analysis.Agoti CN Munywoki PK Phan MVT Otieno JR Kamau E Bett A Kombe I Githinji G Medley GF Cane PA Kellam P Cotten M Nokes DJ
Virus Evol, (2017). 3:vex006