A27 Using whole genome sequence data and minority variant profiles to elucidate transmission patterns during RSV household outbreaks.

Githinji, G., Agoti, C., Munywoki, P., Bett, A., Kellam, P., Cotton, M., Nokes, D.J.

Virus Evolution. 2017. ; 3 : pii: vew036.026.

A26 Transmission patterns and evolution of RSV in a community outbreak identified by genomic analysis.

Agoti, C.N., Munywoki, P.K., Phan, M.V.T., Otieno, J.R., Kamau, E., Bett, A., Kombe, I., Githinji, G., Medley, G.F., Cane, P.A., Kellam, P., Cotton M., Nokes, D.J.

Virus Evolution. 2017. ; :

A49 Molecular evolutionary dynamics of respiratory syncytial virus group A in recurrent epidemics in coastal Kenya.

Otieno, J.R., Agoti, C.N., Gitahi, C.W., Bett, A., Ngama, M., Medley, G.F., Cane, P.A., Nokes, D.J.

Virus Evolution. 2017. ; 3 : pii: vew036.048

A35 Viral evolution and innate immune responses during acute HIV-1 infection and their association with disease pathogenesis.

Hassan, A.S., Hare, J., Kamini, G., Yindom, L.M., Kamali, A., Karita, E., Kilemba, W., Price, M.A., Borrow, P., Bjorkman, P., Albert, J., Kaleebu, P., Allan, S., Fast, P., Hunter, E., Gilmour, J., Ndung’u, T., Rowland-Jones, S., Sanders, E.J., Esbjornsson, J.

Virus Evolution. 2017. ; 3 : pii: vew036.034.

Plasmodium falciparum malaria parasite var gene expression is modified by host antibodies: longitudinal evidence from controlled infections of Kenyan adults with varying natural exposure.

Abdi, A.I., Hodgson, S.H., Muthui, M.K., Kivisi, C.A., Kamuyu, G., Kimani, D., Hoffman, S.L., Juma, E., Ogutu, B., Draper, S.J., Osier, F., Bejon, P., Marsh, K., Bull, P.C.

BMC Infectious Diseases. 2017. ; 17 : 585

Completeness of malaria indicator data reporting via the District Health Information Software 2 in Kenya, 2011-2015.

Githinji, S., Oyando, R., Malinga, J., Ejersa, W., Soti, D., Rono, J., Snow, R.W., Buff, A.M., Noor, A.M.

Malaria Journal. 2017. ; 16 : 344

Cassava, konzo, and neurotoxicity.

Newton, C.R.

The Lancet. Global Health. 2017. ; 5 : e853-e854

Molecular epidemiology of Klebsiella pneumoniae invasive infections over a decade at Kilifi County Hospital in Kenya.

Henson S.P., Boinett C.J., Ellington, M.J., Kagia, N., Mwarumba, S., Nyongesa, S., Mturi, N., Kariuki, S., Scott, J.A.G., Thomson, N.R., Morpeth, S.C.

International Journal of Medical Microbiology. ; 307 : 422-429

Should first-line empiric treatment strategies cover coagulase-negative staphylococcal infections in severely malnourished or HIV-infected children in Kenya?

Obiero, C.W., Seale, A.C., Jones, K., Ngari, M., Bendon, C.L., Morpeth, S., Mohammed, S., Mturi, N., Fegan, G., Berkley, J.A.

PLoS One. 2017. ; 12 : e0182354

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